ECOLOGICAL
STUDIES ON LENTIL, RHIZOBIA;
COMPETITION
AND PERSISTENCE
IN
SOME TROPICAL SOILS
A THESIS SUBMITTED TO THE
GRADUATE DIVISION OF THE
UNIVERSITY OF HAWAII IN
PARTIAL FULFILLMENT
OF THE REQUIREMENTS FOR
THE DEGREE OF
MASTER OF SCIENCE
IN MICROBIOLOGY
DECEMBER, 1979
By
Sheila
N. May
Thesis
Committee:
B. Ben Bohlool, Chairman
L. R. Berger
A. S. Whitney
ACKNOWLEDGEMENTS
I am extremely grateful
to Dr. B. Ben Bohlool, Department of Microbiology, for his guidance, patience,
and enthusiasm throughout all phases of this research,
I would like to thank Dr.
Jim Silva, Department of Agronomy and Soils, for his help with the statistical
analysis of data and Dr. Robert Fox, Department of Agronomy and Soils, for the
use of his experimental phosphorus plots.
In addition, I would like
to thank the NifTAL Project, College of Tropical Agriculture, for the research
assistantship and financial support which made this research possible.
ABSTRACT
Thirty-one strains of Rhizobium
leguminosarum were screened for their ability to fix nitrogen
(effectiveness) on lentils (Lens esculenta). Fluorescent
antibodies prepared against four of the most effective strains (NZP 5400,
Hawaii 5-0, Nitragin 128A12, and Nitragin 128C53) and one other effective
strain, Nitragin 175P1, were strain specific.
NZP 5400, Hawaii 5-0, and Nitragin 128A12 were selected for competition
studies. Rhizobia in lentil nodules
were identified by immunofluorescence.
In two separate growth chamber studies all possible combinations of the
three strains were used to inoculate lentil seedlings grown in sterile
vermiculite. In the first study which
involved a commercial lentil cultivar, the following results were obtained:
Hawaii 5-0 and NZP 5400 were equally competitive against one another and one-third
of the nodules contained both strains; Nitragin 128A12 was a poor competitor
against either of the other two strains and the incidence of double infection
was much lower. The second growth
chamber study involved three lentil cultivars (Benewah, Chilean, and
Tekoa). Results of two strain competition
were: NZP 5400 was superior to Nitragin 128A12 on all three cultivars and only
6% of the nodules were doublyinfected; NZP 5400 was slightly superior to
Hawaii 5-0 on the Chilean cultivar, but the two were equally competitive on the
other two cultivars and one-third of the nodules were doubly-infected; Nitragin
128Al2 dominated Hawaii 5-0 on both Benewah and Tekoa and the two were equally
competitive on Chilean with one-third of the nodules being
doubly-infected. In three strain
competition NZP 5400 was superior to the other two strains on Tekoa and Chilean
but all three strains were equally competitive on Benewah.
The two most competitive
strains from the first study, NZP 5400 and Hawaii 5-0, were further tested in
the field in a Hawaiian inceptisol (Ustic Humitropept, pH 6.1). Commercial lentil seeds were pelleted with
equal numbers of both strains. The two
strains were equally competitive against one another and both were dominant
against the native ineffective strains of lentil rhizobia which were present in
low numbers. One-third of the nodules
contained both of the introduced strains.
One year later, uninoculated lentil seeds were planted in these same
field plots to assess the persistence of these two strains. Both strains
persisted over this period, but the Hawaiian isolate, Hawaii 5-0, was present
in a higher proportion (51%) of the nodules. Only 24% of the nodules contained
both strains.
The competitiveness of
all three strains was tested in another field experiment in a Hawaiian oxisol
(Tropeptic Eutrustox, pH 5.8). Commercial lentil seeds were pelleted with equal
numbers of all three strains and competition was assessed at low, medium, and
high levels of phosphorus. Early (10 days)
and late (8 weeks) sampling of nodules yielded the following results: Hawaii 5-0 was superior to
the other two strains at the low phosphorus level; Hawaii 5-0 and Nitragin
128A12 were equally competitive at the medium phosphorus level; all three strains
were approximately equal in competitiveness at the high phosphorus level. The
incidence of double-infection varied from 0% to 26% depending on the phosphorus
level and the sampling time.
TABLE
OF CONTENTS
Page
ACKNOWLEDGEMENTS.................................... 2
ABSTRACT............................................ 3
LIST OF
TABLES......................................
6
LIST OF
FIGURES.....................................
7
CHAPTER 1:
INTRODUCTION.............................
8
CHAPTER 2: LITERATURE
REVIEW........................ 10
CHAPTER 3: MATERIALS AND
METHODS.................... 16
CHAPTER 4:
RESULTS..................................
28
CHAPTER 5:
DISCUSSION...............................
45
BIBLIOGRAPHY........................................ 52
LIST
OF TABLES
Table Page
1 Sources
of cultures.........................
17
2 Acetylene reduction screening of
Rhizobium leguminosarum strains on
lentils
(Lens esculenta).................... 29
3 Specificity
test of Rhizobium legum-
inosarum
fluorescent antibodies............. 30
4 Percentage
of nodules formed by
inoculated
strains of Rhizobium legum-
inosarum
(Commercial variety) .............. 31
5 Percentage
of nodules formed on three
lentil
cultivars by inoculum strains of
Rhizobium
leguminosarum.....................
36
6 Competition
between introduced and
indigenous
strains of Rhizobium legum-
inosarum
on field-grown lentils (Commer-
cial
variety)...............................
38
7 Persistence
of Rhizobium leguminosarum
strains
in an Hawaiian inceptisol........... 40
8 Percentage
of nodules formed by intro-
duced
strains of Rhizobium leguminosarum
on
field-grown lentils over three sampling
periods
at three phosphorus levels..........
41
9 Summary
of three strain competition:
comparing
Growth Chamber Competition
Experiment
I vs. Field Experiment III....... 42
10 Rhizobium
leguminosarum strains recovered
from
soil cores at the termination of
Field
Experiment I..........................
44
LIST
OF FIGURES
Figure Page
1 Lentil
nodule containing one strain
of
Rhizobium leguminosarum................... 35
2 Lentil
nodule containing two sero-
logically
distinct strains of
Rhizobium
leguminosarum......................
35
CHAPTER
1
INTRODUCTION
Bacteria of the genus Rhizobium
comprise a large group of free-living soil bacteria. These bacteria, diverse in such characteristics as colony
morphology, biochemistry, growth and serology, have in common the ability to
form a specific symbiotic association with leguminous plants. As a result of this association the rhizobia
fix atmospheric nitrogen into a combined form which the plant can use. However, Rhizobium strains with the
ability to infect a particular legume vary in effectiveness (nitrogen-fixing
ability) and many strains are completely ineffective
(non-nitrogen-fixing). Thus, one of the
most important objectives in legume inoculation research is the selection of
the most effective strains of rhizobia for a particular host. In addition, inoculant strains must have the
ability to compete successfully for nodule sites against the indigenous soil
microflora which may include ineffective strains of rhizobia. There have been many reports of differential
competition between effective and ineffective strains (Nicol and Thornton,
1941; Robinson, 1969; Russell and Jones, 1975; Franco and Vincent, 1976) as
well as between effective strains (Caldwell, 1969; Marques Pinto et al. 1974).
Differential competition
has been attributed to relative growth rates of competing strains in the
rhizosphere (Nicol and Thornton, 1941), preferential selection of a strain by
the host (Vincent and Waters, 1953), differential ability to tolerate a
particular pH (Russell and Jones, 1975a), climate and soil factors (Read,
1953), and antagonism between competing strains (Schwinghamer, 1971).
The ability of elite Rhizobium
strains to persist in the soil over prolonged periods of time has also been
shown to be desirable, particularly with respect to clover species and other
pasture legumes (Brockwell and Dudman, 1968; Dudman and Brockwell, 1968;
Bergersen, 1970; Date, 1970; Chatel et al. 1973; Gibson et al. 1976). This ability may also be important to
ensure prompt effective nodulation of grain legumes when inoculation every
season may not be practical or practiced.
The purpose of this
research was:
(1) to determine those
strains/isolates of Rhizobium leguminosarum which were the most
effective on lentils (Lens esculenta) by screening all available
cultures;
(2) to assess the
competitiveness of three of the most effective strains under both controlled
and field conditions;
(3) to assess the
persistence of two of the most competitive strains under field conditions.
In order to study both
competition and persistence the proper methodology is required to identify
inoculant strains. In this study
immunofluorescence was used for Rhizobium strain identification.
CHAPTER
2
LITERATURE
REVIEW
Competition between Rhizobium
Strains
The early experiments of
Dunham and Baldwin (1931) revealed that when pairs of effective and
ineffective Rhizobium strains were applied simultaneously to either
alfalfa, clover, peas, or soybeans there was variability in which strain would
be successful in nodulation. Thus, the
majority of the nodules on the host were not necessarily formed by the effective
strain. In addition, ineffective and
effective nodules could be present on the same plant. If both types of nodules were present, the growth and nitrogen
content of the plant was intermediate between that of plants which had only
ineffective or effective nodules, This has also been observed with both
crimson clover (Burton and Allen, 1949) and white clover (Jones and Russell,
1972). Burton and Allen (1949) also
showed that if plants were inoculated with mixtures of only effective strains,
the growth and nitrogen content of the plants were slightly superior to that of
plants which received only a single effective strain as inoculum. This has also been confirmed by other
investigators (Dorosinskii and Makarova, 1976; Bordeleau and Antoun, 1977).
Dunham and Baldwin (1931)
proposed that Rhizobium strains may vary in their ability to infect the
host with this ability being independent of effectiveness.
Nicol and Thornton (1941)
showed that pairs of ineffective and effective Rhizobium strains
compete in the rhizosphere of the host plant.
In their experiments with clover and pea, the strain with the higher
initial growth rate formed the majority of the nodules. They concluded that effectiveness and
competitiveness are independent characteristics, and when competition between
strains occurs in the rhizosphere, relative infectivity can be masked.
Harris (1953) related
dominance in competition to not only the ability of a strain to proliferate in
the host rhizosphere but also to a property he labelled
"incursion." Harris described
this as the ability of a strain to migrate from the initial site of inoculation
and establish in the root zone in the presence of other microflora.
Baird (1953) demonstrated
that growth of Rhizobium strains in sterile soil was not at all related
to relative nodulating success in unsterile soil. Read (1953) also failed to relate relative growth rates of
competing strains in sand culture to the establishment of strains in the
field. Climate and soil factors
influenced the establishment of inoculum strains, and Read obtained different
results in different locations. Because
of these differences, Read suggested using several effective strains as a
mixed inocula to overcome establishment failures. Roughley et al. (1976) found that differences in the competitive
ability of multistrain inoculants could be modified by localities. Russell and Jones (1975) showed that with
tube culture-grown white clover another soil factor, pH, could affect the
competitive ability of paired effective and ineffective strains. Under acid
conditions the effective strain formed the majority of the nodules, but at
neutral or alkaline pH the ineffective strain was dominant.
In 1953, Vincent and
Waters introduced the concept that the host preferentially selects certain
strains of Rhizobium. When a
mixture of five strains of Rhizobium trifolii was applied to four
different clover species, different strains were dominant on different species.
The proportion of strains found in the nodules was not related to bacterial
numbers in the rhizosphere. Waters also
found this to be the case with varieties within species (Vincent, 1954). Although some investigators have shown that
the host preferentially selects effective strains from mixtures of effective
and ineffective strains (Robinson, 1969; Jones and Russell, 1972; Marques Pinto
et al. 1974; Masterson and Sherwood, 1974; Mytton, 1975; Labandera and Vincent,
1975; Russell and Jones, 1975; Diatloff and Brockwell, 1976), others have found
the reverse to occur (Vincent, 1954; Franco and Vincent, 1976; Mytton and de
Felice, 1977). The host genotype has
also been shown to select certain serogroups from several effective strains
(Means et al. 1961; Caldwell and Vest, 1969).
Interstrain antagonism
has been observed in culture and may have some effect on competition between strains in
the field (Schwinghamer, 1971; La Judie, 1974). This antagonism was due to mildly antibiotic substances,
bacteriocins and phage. Schwinghamer
and Brockwell (1978) tested bacteriocinogenic and lysogenic strains of R.
trifolii against sensitive strains in sterile broth and peat culture,
and found that the producing strains suppressed growth of the sensitive
strains.
Skrdleta and Karimova
(1969), working with Rhizobium japonicum, related
competition to the ratio of inoculum strain cells applied in suspension. However, Means et al. (1961) showed that one
strain of R. japonicum, USDA 76, had a competitive advantage over
other strains even if present in only 1.1% of the mixed inoculum. Russell and Jones (1975) showed that an
effective strain of R. trifolii produced the majority of clover
nodules against an ineffective strain even when present only as a minor
proportion of the mixed inoculum.
Pinto et al. (1974)
related nodulating success to the proportionate representation of a strain on
the root surface. They found that in
some instances representation on the root was related to the proportions of the
two strains supplied in the inoculum, but there were other instances where this
was not the case.
In order for inoculum
strains to overwhelm native strains, Holland (1970) recommended an application
of 7.5 x 104 rhizobia/seed. Bohlool and Schmidt (1973) recommended the use of a competition curve, in
which the log of the number of an introduced strain is plotted against the
percentage of nodules formed by that strain.
Once a critical inoculum level is reached such that the resident strain
produces very few nodules, an inoculum rate for a particular soil can be
assessed. Amarger (1974) suggested a similar approach, but rather than a
curve, a linear regression was estimated.
Double Infection in
Legume Nodules.
According to Dunham and
Baldwin (1931) there were some early reports of double infection in legume
nodules. Greig-Smith in 1906 isolated
two culturally distinct strains from a single lupine nodule and de Rossi in 1907
reported a similar finding. Sarles used serological methods to identify
strains of Rhizobium japonicum and found two serologically
distinct strains in a single soybean nodule.
Gray isolated two different strains from a single alfalfa nodule. Prior to 1970 the incidence of double infection was observed infrequently and was
believed to be a rare occurrence (Vincent, 1954; Means et al. 1961).
Skrdleta, using
immunodiffusion for strain identification, reported that 10% of soybean
nodules from plants grown in nonsterile field soil could contain two strains of
Rhizobium japonicum.
Lindemann et al. (1974), using the more sensitive fluorescent antibody
technique, reported that up to 32% of soybean nodules from plants grown in
sterile sand could contain two serologically distinct strains of Rhizobium
japonicum. These investigators
provided evidence for double infection by staining both nodule smears and cultured
isolates from surface sterilized nodules.
Some reports in the
literature indicate that certain conditions may be required to achieve double
infection. Skrdleta (1970; 1973) found
that in the field a maximum frequency of 10% double infection could be
achieved only if two strains were both applied at sowing and in equal
proportions. Lindemann et al. (1974)
reported that a critical level of 1 x 104 rhizobia/ml (50:50 mixture
of two strains) was required to obtain any double infection. Increasing the density of the 50:50 mixture
to 1 x 108 rhizobia/ml resulted in the highest frequency of double
infection (32%).
Johnston and Beringer
(1975), however, used pairs of effective strains of Rhizobium leguminosarum
to inoculate peas growing in flasks and found that the frequency (19%) of
doubly-infected nodules did not change if they varied the ratios of the two
applied strains. The strains used in
these experiments were genetically marked for auxotrophy and antibiotic
resistance. Johnston and Beringer
(1976) also obtained a 19% frequency of doubly-infected nodules when an
effective and an ineffective pair of strains was used as inoculum.
Some investigators have
found that double infection varies depending on the species of host. Marques Pinto et al. (1974) used the same
two strains to inoculate both Medicago truncatula and Medicago
sativa growing in agar slants.
Using differential antibiotic resistance to identify Rhizobium
strains they found that high frequencies (25%) of double infection occurred on M.
truncatula, but only 10% of the nodules on M. sativa
contained two strains. This host effect
has also been reported for clover (Labandera and Vincent, 1975). Trifolium subterraneum and Trifolium
polymorphum inoculated with equal proportions of two R. trifolii
strains had 10-15% doubly-infected nodules.
However, when the same mixed inocula was applied to Trifolium repens
only 5% or less of the nodules were doubly-infected. These investigators used differential antibiotic resistance and
cultural differences to identify strains in nodules from tube culture plants.
More recently, Jones and
Bromfield (1978) used pairs of effective and ineffective strains of Rhizobium
trifolii to inoculate white clover (Trifolium repens cv.
S184). These investigators used
immunofluorescence and antibiotic resistance markers for strain identification
and found that mixed infection varied from 1% to 22%, depending on the strain
pairs used. Soil-grown plants had fewer
doubly-infected nodules than plants grown in tube culture. Jones and Bromfield concluded that double
infection is an artifact associated with artificial culture medium. This has also been proposed by other
investigators (Vincent, 1954: Marques Pinto et al. 1974; Labandera and Vincent,
1975). Vincent (1954) proposed that in
agar tube experiments organisms are more intimately mixed than in the soil and
this could result in high frequencies of double infection in tubegrown plants. However, Kvien (1979) reported up to 30%
double infections on field-grown soybeans.
He related this to the high rates of inoculum that he applied. The incidence of double infection was higher
on certain soybean lines than others and was also more frequent in wet years
than in dry.
CHAPTER 3
MATERIALS AND METHODS
Source and Maintenance of Cultures
Table
1 shows the strains of Rhizobium leguminosarum used in this study
and their origin. All strains were
maintained on yeast extract mannitol (Bohlool and Schmidt, 1970), which had the
following composition:
All strains were grown in broth with the same
composition as above. All media were
sterilized by autoclaving at 20 lb. (121˚C) for 20 minutes.
Lentil Seeds, Surface Sterilization, and
Plant Growth: Growth Chamber.
Lentil
seeds were surface-sterilized with 4% calcium hypochlorite for 15 minutes,
rinsed six times in sterile water, and germinated aseptically in petri dishes
containing 1% water agar. For strain
screening, Growth Chamber Competition Experiment I, and all field experiments,
lentil seeds of a commercial
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variety were used. These seeds were provided by Dr. D. Munns
and originated from Spokane Seed Company, Spokane, Washington. In Growth Chamber Competition Experiment II
three lentil cultivars were used: Tekoa (a variety), Benewah (a pure line
cultivar) and commercial Chilean (neither a variety nor a pure line). These were provided by Dr. D. F. Bezdicek,
Department of Agronomy and Soils, Washington State University, Pullman,
Washington, who obtained them from Dr. Van Wilson, USDA lentil geneticist. For strain screening each lentil seedling
was planted in a 25 x 200 mm sterile test tube unit containing vermiculite and nitrogen-free
nutrient solution (Broughton and Dilworth, 1971). In growth chamber competition experiments seedlings were planted
in modified Leonard jars (Leonard, 1943), which contained sterile vermiculite
and a nitrogen-free nutrient solution (Broughton and Dilworth, 1971) which had
the following compositions (For each 10 liters of complete culture solution 5.0
ml each of solutions 1 to 4, was added to 5.0 liters of water and diluted to 10
liters.)
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Strain Screening
All available cultures
were screened for effectiveness on lentils. Exceptions were: the 0. N. Allen
strains, TAL strain, and those provided by Dr. D. F. Bezdicek. These were not available during the initial
screening period. Slants of each
culture were washed with 2 ml. of sterile water. Each of two 25 x 200 mm sterile test tube units, containing one
lentil seedling, received 1 ml of inoculum.
Eight units were left uninoculated.
After inoculation, a 1 cm. layer of sterile perlite was added to each
tube. Plants were grown in an EGC Model
M-31 growth chamber (Environmental Growth Chambers, Chagrin Falls, Ohio) with a
14 hour day and a day/night temperature of 29°C/24°C. Plants were watered daily with sterile nitrogen-free nutrient
solution. After four weeks each tube
was stoppered and injected with 5.0 ml of acetylene to analyze for nitrogenase
activity (Hardy et al., 1968). After 30
minutes incubation, 0.5 ml was removed from each tube and injected into a
Bendix-2500 gas chromatograph equipped with an H2 flame ionization
detector and a Poropak-T column at 105°C.
Preparation of
Fluorescent Antibodies (FA), Immunofluorescent (IF) Staining, and Microscopy.
Fluorescent antibodies
were prepared against the somatic components of NZP 5400, Hawaii 5-0, and
Nitragin strains 128A12, 128C53, and 175P1. Preparation of antisera and conjugation
procedures were according to Schmidt et al. (1968) except cultures were grown
in YEMS broth for three days instead of seven days. Smears from pure cultures and nodules were stained by the method
of Schmidt et al. (1968), using gelatin-rhodamine isothiocyanate conjugate to
control nonspecific staining and autofluorescence (Bohlool and Schmidt,
1968). Stained nodule and culture
smears were observed on a Zeiss universal microscope equipped for
epifluorescence and transmitted dark field.
Incident illumination was from an HBO-200 (OSRAM) light source with a
fluoroscein isothiocyanate (FITC) filter.
Transmitted dark field was from a 12V quartz halogen lamp, using a Zeiss
Ultracondenser. Photographs were taken
with a Leica camera, using Kodak Tri-X for black-and-white, and Kodak
Ektachrome 200 for color.
Test for Cross-Reacting
Bacteria at Field Sites.
Prior to the installation
of the field experiments, lentils were grown in pots containing the
uninoculated field soil. After nodules
developed, nodule isolates were stained with each FA. A soil sample from each field site was stained by the FA membrane
filter technique of Bohlool and Schmidt (1973a), using 25 mm diameter
polycarbonate filters (Nuclepore) pretreated with Irgalan Black (Hobbie et al.
1977) and the gelatin-rhodamine isothiocyanate conjugate was allowed to dry
completely on each filter prior to IF staining.
Growth Chamber
Competition Experiment I: Commercial Seeds
In this experiment three
seedlings were planted in each Leonard jar.
Dilutions of three-day-old shake flask cultures of NZP 5400, Hawaii 5-0,
and Nitragin 128A12 were counted using the FA membrane filter technique. Stock solutions, each containing 1 x 106
rhizobia/ml, were prepared for each strain and all possible multistrain
combinations. Double strain inocula contained equal proportions of two strains
and the triple strain inocula contained equal proportions of all three strains.
Each of the three seedlings in a jar received 1 ml of a particular inoculum
mixture and two jars were left uninoculated.
A 1 cm layer of sterile perlite was added to all the jars. The design of the experiment was a
randomized complete-block with three replicates. Plants were grown in the growth chamber for four weeks.
Growth Chamber Competition
Experiment II: Strains x Cultivars
The three lentil
cultivars, Benewah, Chilean, and Tekoa were grown in Leonard jars and
inoculated with all possible combinations of NZP 5400, Hawaii 5-0 and Nitragin
128A12 as above. This experiment was
not replicated.
Sampling and Staining of
Nodules: Growth Chamber Competition Experiments I and II
Plants were harvested
after four weeks. Tops were removed
and each root was placed in a 60 ml serum bottle. The bottles were stoppered and injected with 6 ml of acetylene
to assay for nitrogenase activity (Hardy et al. 1968). After 30 minutes incubation, 0.5 ml was
removed from each bottle and injected into the gas chromatograph. Roots from each bottle were washed in
distilled water containing .1% Tween-80 and rinsed four times to remove any
rhizobia which may have been present on the root surface. Nodules were surface sterilized in mercuric
chloride and a random sample of at least 50% of the nodules from each plant was
removed for FA staining. Each nodule
was touched to the surface of at least four slides, and stained with the
appropriate FA.
Field Experiment I: Two
Strain Competition
Hawaii 5-0 and NZP 5400
were grown separately for five days at 30°C in gamma irradiated peat (Roughley
and Vincent, 1967). Serial dilutions of
the peat were counted by the FA membrane filter technique and by viable
count. Each culture contained 9 x 108
rhizobia/gm. Peat was coated onto
lentil seeds using 40% gum arabic, and four seed coating treatments were
employed: sterile peat, peat containing Hawaii 5-0 or NZP 5400 only, or a peat
mixture which contained equal numbers of both strains. All coated seeds were pelleted with calcium
carbonate (Brockwell, 1962), and the total rhizobia/seed was 5 x 104,
as determined by the FA membrane filter technique and viable count. Seeds were planted at the Mauka Field
Station of the University of Hawaii in a randomized complete-block design in
three replicates. The soil, Makiki
stony clay, an Andic Ustic Humitropept, pH 6.1, contained a low number of
ineffective rhizobia (less than 100) as determined by the most-probable number
method (Date and Vincent, 1962).
After ten weeks, ten
plants were harvested from each treatment. Roots were removed and tested for
nitrogenase activity by the acetylene reduction assay as described above. Plant tops were dried in a 60°C oven and
weighed after drying. Roots were washed
as above and nodules were counted and pooled from each treatment. A random sample of 50
nodules/treatment/replicate was stained according to the protocol above.
Field Experiment II:
Persistence
One year after the
installation of Field Experiment I, uninoculated lentil seeds were coated with
gamma irradiated peat and calcium carbonate and were planted in the same
experimental plots as Field Experiment I.
The plots had been left undisturbed since the previous harvest.
Ten plants from each
treatment were harvested after ten weeks and were analyzed as above. However, a random sample of at least eight
surface sterilized nodules was removed from each plant and stained as
previously described.
Field Experiment III:
Three Strain Competition
Hawaii 5-0, NZP 5400, and
Nitragin 128A12 were grown separately for five days at 30°C in gamma irradiated
peat (Roughley and Vincent, 1967).
Dilutions of the peat were counted as in Field Experiment I and all
three peat cultures were mixed just prior to seed coating in proportions adjusted
to allow for equal numbers of all three strains. The peat mixture was coated
onto lentil seeds as before. The total
rhizobia/seed was 1.85 x 105.
Inoculated and uninoculated seeds were planted at the Poamoho Research
Station of the University of Hawaii. The soil, Wahiawa silty clay, a clayey,
kaolinitic, isohyperthermic Tropeptic Eutrustox, had a pH of 5.8. Seeds were planted in three different
phosphorus treatments: low (.003 ppm phosphorus in solution), medium (.05 ppm
phosphorus in solution), and high (.8 ppm phosphorus in solution)(Fox and
Kamprath, 1970). The design of the
experiment was an augmented block in which the low and high levels were not
replicated, but the medium level was replicated three times. These plots were generously provided by Dr.
Robert L. Fox, University of Hawaii.
Plants were harvested at
ten days, five weeks, and eight weeks. Roots were washed and surface sterilized
as above; however, nodules were preserved by drying them in a 60°C oven. For the ten-day sampling, every nodule on at
least six plants for each treatment was typed by immunofluorescence. At the
five-week sampling period, ten plants were harvested from each treatment and
over 25% of the nodules were typed. Acetylene reduction was performed on 15
plants from each treatment in the eight-week group, and 25% of the nodules were
typed. Acetylene reduction was done by
placing three plants from the same treatment in a tube (280 ml vol.), which was
stoppered and injected with 10% acetylene at the field site. Samples were brought back to the lab and
analyzed for nitrogenase activity as above.
Relative Numbers of
Rhizobia in the Rhizosphere of Lentils.
At the termination of
Field Experiment I, soil cores with an approximate volume of 200 cc were taken
from the root zone of 16 remaining plants.
This represented four plants from each inoculation treatment. As much plant material as possible was
removed from each soil sample. The soil
was dried in a 105°C oven and sieved thru a 2 mm mesh sieve to remove all root
and module material. Each soil sample was
thoroughly mixed and the numbers of Hawaii 5-0 and NZP 5400 in a 10 g sample from
each core were counted by the FA membrane filter technique of Bohlool and
Schmidt (1973).
Statistical Analysis of
Competition between Strains
Chi-square analysis was
used to assess the competitiveness of Rhizobium strains in both growth
chamber and field experiments. In two
strain competition the number of singly-infected nodules produced by one
strain relative to the second strain was analyzed as a 50:50 ratio, as this was
the ratio of the two strains in the applied inoculum. The ratio of single strain:single strain:double strain nodules
was analyzed as a 1:1:1 ratio. In three
strain competition the number of nodules produced by each single strain was
analyzed as a 33:33:33 ratio as this was the ratio of the three strains in the
applied inoculum. In comparing three
strain competition in the growth chamber to three strain competition in the
field, results of Growth Chamber Competition Experiment I were used as the
expected values. The observed values
were those obtained at the five-week sampling period in the medium phosphorus
level of Field Experiment III. Thus,
the plants were at the same stage of growth, the same cultivar of seeds were
used, and both experiments were replicated three times.
CHAPTER 4
RESULTS
Strain Screening
Results of the acetylene
reduction strain screening are shown on Table 2. Of the 31 strains or isolates screened, 11 were ineffective and
five were highly effective.
Fluorescent Antibodies
(FA)
The FA prepared against
NZP 5400, Hawaii 5-0, and Nitragin strains 128A12, 128C53, and 175P1 exhibited
a high degree of strain specificity as shown on Table 3. The FA prepared against the three strains
used in all further experiments (NZP 5400, Hawaii 5-0, and Nitragin 128A12)
reacted 4+ only with the homologous bacteria.
This includes rhizobia isolated from the experimental sites and over 40
other strains of Rhizobium leguminosarum tested. In addition, these FA did not react with
bacteria recovered from field site soils.
Growth Chamber
Competition Experiment I
Results of this
experiment are shown on Table 4.
Uninoculated controls were nodule-free and single-strain inoculated
plants had nodules containing only the inoculum strain. In two strain competition NZP 5400 and
Hawaii 5-0 were equal in competitive ability and 300 of the nodules contained
both strains. Chi-square analysis of
the ratio of Hawaii 5-0:NZP 5400 revealed that each strain produced an equal
number of nodules (x2=1.92, 1 degree of freedom (df)). The ratio of Hawaii 5-0:NZP
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5400:mixed did not differ
significantly from a 1:1:1 ratio (x2=2.47, 2 df).
NZP 5400 dominated
Nitragin 128A12, and 3% of the nodules were doubly-infected. There was a significant departure (P
<.Ol) from a 50:50 ratio of NZP 5400:Nitragin 128A12 (x2=85.37, 1
df). The ratio of NZP 5400:Nitragin
128A12: mixed was significantly different (P <.Ol) from 1:1:1 (x2=165.62,
2 df).
Hawaii 5-0 was superior
to Nitragin 128A12 and the ratio of Hawaii 5-0:Nitragin 128A12 deviated
significantly (P <.Ol) from 50:50 (x2=15.80, 1 df). Eighteen percent of the nodules were
doubly-infected. Again, there was a significant
departure (P <.Ol) from a 1:1:1 ratio of Hawaii 5-0: Nitragin 128A12:mixed
(x2=30.02, 2 df).
Plants which received the
mixture of all three strains were nodulated mainly by Hawaii 5-0 and NZP 5400,
and the two were equal in competitive ability.
Nitragin 128A12 produced 2% of the nodules. There was a significant departure (P <.Ol) from a 1:1:1 ratio
of nodules produced by each single strain (x2=41.87, 2 df). In the case of double infection, 18% and 12%
of the nodules contained both Hawaii 5-0 and Nitragin 128A12 or Hawaii 5-0 and
NZP 5400 respectively. Only 3% of the
nodules contained both NZP 5400 and Nitragin 128A12. None of the nodules contained all three strains.
Figure 1 is a
representative microscope field of a smear of a nodule which contained one
strain of R. leguminosarum.
This slide was stained with the FA for Hawaii 5-0. Figure 2 is a representative microscope
field of a smear of a nodule which contained two serologically distinct strains
of R. leguminosarum.
Bright cells are Hawaii 5-0 and were stained with the FA specific for
this strain. Dimmer cells, visualized
by dark field illumination, represent Nitragin 128A12.
Growth Chamber
Competition Experiment II
Results of this
experiment are shown in Table 5. The
chi-square values are also shown in this table. In two strain competition, Hawaii 5-0 and NZP 5400 were
approximately equal in competitive ability on both Tekoa and Benewah. NZP 5400 was superior to Hawaii 5-0 on the
Chilean cultivar. Again a high
percentage of nodules contained both NZP 5400 and Hawaii 5-0.
On all three cultivars
NZP 5400 dominated Nitragin 128A12, and less than 6% of the nodules contained
both strains.
Nitragin 128A12 and
Hawaii 5-0 were approximately equal in competitive ability on Tekoa and
Chilean. Nitragin 128A12 dominated
Hawaii 5-0 on Benewah. Between 0% and
36% of the nodules contained both strains, depending on the cultivar.
Field Experiment I: Two Strain Copetition
Table 6 shows that in this experiment all of the nodules on the
single-strain inoculated plants (commercial variety) contained only the
inoculum strain, even though a low number of ineffective rhizobia were present
in this soil. Control plants were also
nodulated, but analysis of variance revealed that the controls had
significantly fewer (P=.05) nodules than either of the inoculated
treatments. The majority of the control
nodules did not react with either fluorescent antibody and were produced by the
“native” strains of rhizobia. Only 12%
of the control nodules reacted with FA for NZP 5400 and 6% with FA for Hawaii
5-0. A more critical examination of
other control plants revealed that the control rows had been contaminated late
in the experiment by Hawaii 5-0
Figure 1.
Microscope field of a smear of nodule which
contained only one strain of Rhizobium legu-
minosarum.
Figure 2.
Microscope field of smear of a nodule which
contained two serologically distinct strains
of Rhizobium leguminosarum. Bright cells are
Hawaii 5-0 and were stained with the fluores-
cent antibody specific for this strain.
Dim-
mer cells in the background are visualized by
darkfield illumination and represent Nitragin
128A12.
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or NZP 5400. Nodules on the main root, close to
the seed did not react with either FA.
Competition between
Hawaii 5-0 and NZP 5400 resulted in equal numbers of nodules being produced by
each single strain. The ratio of Hawaii
5-O:NZP 5400 nodules did not differ significantly (P> .05) from 50:50 (x2=.10,
1 df). A high percentage (38%) of
doubly-infected nodules occurred. The
ratio of Hawaii 5-O:NAP 5400:mixed did not differ significantly (P >.05)
from a 1:1:1 ratio ( x2=1.56, 2 df).
Statistically there was
no significant difference between treatments with respect to plant dry
weights. However, acetylene reduction
values between treatments differed significantly (P=.05). Controls reduced
significantly (P=.05) less acetylene than the three inoculated treatments, and
the plants which received the double-strain inoculum reduced significantly more
acetylene than either of the single-strain inoculated plants.
Field Experiment II: Persistence
Table 7 shows that both
NZP 5400 and Hawaii 5-0 persisted in this particular soil for a one-year
period. With the exception of the
control rows, less than 10% of the nodules were formed by "native"
strains. Plants grown in rows which had
been previously inoculated with both strains had 51% of their nodules formed by
Hawaii 5-0, 19% by NZP 5400, and 24% contained both strains. The ratio of Hawaii 5-O:NZP 5400 nodules
differed significantly (P <.Ol) from 50:50 (X2=34.38, 1 df).
The ratio of Hawaii 5-O:NZP 5400: mixed differed significantly (P
<.Ol) from 1:1:1 ( X2=44.32, 2 df).
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Field Experiment III:
Three Strain Competition
Results of the 10-day,
5-week, and 8-week sampling periods at all three phosphorus levels are shown on
Table 8. In the low phosphorus level,
Hawaii 5-0 was superior to the other two strains. In the medium phosphorus
level, with the exception of the 5-week sampling period, Hawaii 5-0 and
Nitragin 128A12 were equal in competitive ability. The ratio of the number of nodules produced by each of these two
strains did not differ significantly (P>.05) from 50:50 (X2=1.69, ldf, 10-day period; X2=2.48,
1 df, 8-week period). In the high
phosphorus level, with the exception of the 5-week sampling period, all three
strains were equal in competitive ability.
Approximately 50% of the
uninoculated control plants were nodulated at the 8-week sampling period. However, the mean number of nodules on each
control plant was 6 compared to 18 on each plant which had been inoculated. Immunofluorescence typing of the control
nodules revealed that they were all formed by the three introduced strains.
The acetylene reduction
assay performed at 8 weeks revealed that there was no significant difference
between phosphorus levels in ethylene produced/plant/hour (F=1.03, 4 df).
Table 9 is a summary of
three strain competition in Growth Chamber Experiment I vs. Field Experiment
III (medium phosphorus level, 5-week sampling period.) Hawaii 5-0 formed a high percentage of
nodules in both the growth chamber and in the field. NZP 5400 performed better in the growth chamber than in the
field. Nitragin 128A12 performed better
in the field than in the growth chamber.
The proportion of doubly infected nodules in both growth chamber and the
field was the same.
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Relative Numbers of
Rhizobia in the Rhizosphere of Lentils.
Table 10 shows the number
of bacteria recovered from the soil cores at the termination of Field
Experiment I. The ratio of Hawaii
5-O:NZP 5400 in treatments inoculated with a 50:50 ratio of the two strains
differed significantly (P <.Ol) from 50:50 ( x2=8.19, 1 df).
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CHAPTER
5
DISCUSSION
In these studies twenty
of thirty-one strains/isolates of Rhizobium leguminosarum were shown to
have varied degrees of effectiveness on lentils. The remaining strains were ineffective and thus did not benefit
the host plant.
Three of the most
effective strains, NZP 5400, Hawaii 5-0, and Nitragin 128A12, were
serologically distinct as determined by immunofluorescence microscopy and also
by an enzyme-linked immunosorbent assay (Berger et al. 1979). The specificity of the fluorescent
antibodies (FA) prepared against the three strains made it possible to use all
three strains in various combinations to inoculate lentils and to easily identify
the strains present in individual lentil nodules.
In both a replicated
growth chamber experiment (I) and in one field experiment (I) NZP 5400 and
Hawaii 5-0 were equally competitive. In
this field experiment none of the nodules on inoculated lentils were formed by
native strains. This could either be
due to the high levels of inocula which were applied directly to the seed or,
these strains are more competitive than the indigenous population of
ineffective lentil rhizobia. Both strains persisted in this field over one year
and the indigenous strains only formed 10% or less of the nodules, with the
exception of the control plants.
Control plants were nodulated mainly by both of the previously
introduced strains and only 24% of the nodules contained the indigenous
strains. This implies that NZP 5400 and
Hawaii 5-0 had not only survived in this soil, but also were more competitive
than the "native" strains without having had the advantage of being
strategically placed directly on the seed.
The locally isolated strain, Hawaii 5-0, was present in over 50% of the
nodules in rows which had been inoculated one year previously with both
strains. Thornton (1943) found that
locally isolated strains of R. trifolii persisted in greater
numbers than commercial strains in two out of three instances.
According to Fred et al.
(1932) phosphates are distinctly stimulating to the multiplication of
rhizobia, however, to this author's knowledge the effect of phosphorus
concentrations on the competitiveness of Rhizobium strains has not
previously been assessed. Field
Experiment III results revealed that the concentration of the limiting
nutrient, phosphorus, did have an effect on the competitiveness of the three
strains. In a comparison of both early
(10 day) and late (8 week) nodulation, Hawaii 5-0 was superior to the other
strains at the low phosphorus level.
Hawaii 5-0 and Nitragin 128A12 were equally competitive at the medium
level. All three strains were equally
competitive at the high level of phosphorus. Thus, in the most stressed
situation (low phosphorus) the locally isolated strain was more competitive
than either of the two commercial strains.
In 1941 Nicol and
Thornton related competition between Rhizobium strains to relative
growth rates of the strains used as inocula.
Other investigators have failed to relate growth rates with
competitiveness (Baird, 1953; Read, 1953, Vincent and Waters, 1953). In Field Experiment I, the two strains
Hawaii 5-0 and NZP 5400 were equally competitive, however, at the termination
of this experiment, recovery from soil cores from plants which had received the
two-strain inoculum revealed that NZP 5400 was present in higher numbers than
Hawaii 5-0. If one can assume that both
strains can be recovered with equal efficiency from this soil, then growth
rates and competitiveness are not related characteristics in the case of these
two strains and this particular soil, and the ability to compete may be under
genetic control.
In 1954 Vincent reported
that with clover species the host variety preferentially selects one strain
over another. Growth Chamber Experiment
II results of two strain competition revealed that the genotype of the host
did have an effect on the competitiveness of Hawaii 5-0 and Nitragin
128A12. Some difference was observed in
the performance of Hawaii 5-0 and NZP 5400, but no differences were observed
with respect to NZP 5400 and Nitragin 128A12, in that NZP 5400 dominated
Nitragin 128A12 on all three cultivars.
Read (1953) showed that
at different sites, different strains of R. trifolii became
better established. Although a
two-strain inoculum was used at one site in Field Experiment I and a
three-strain inoculum was used at the second site in Field Experiment III the
competitiveness of NZP 5400 and Hawaii 5-0 will be compared. In Field Experiment I, Hawaii 5-0 and NZP
5400 were equally competitive against each other, but in Field Experiment III,
Hawaii 5-0 was dominant against NZP 5400 at both the low and medium levels of
phosphorus. Read (1953) suggested that
because strains establish differently in different localities multistrain
inoculants should be used. This has
also been proposed by other investigators (Burton and Allen, 1949; Read, 1953;
Vincent, 1954; Marshall, 1956; Roughley, 1970), provided all strains included
are effective on the host plant (Burton and Allen, 1949; Jones and Russell,
1972). In addition, several
investigators have shown that plants inoculated with mixtures of effective
strains had the best growth and the highest content of nitrogen (Burton and
Allen, 1949; Dorosinskii and Makarova, 1976; Bordeleau and Antoun, 1977). It is the opinion of this author that the
three effective strains, NZP 5400, Hawaii 5-0, and Nitragin 128A12, should be
used as a multistrain inoculum on lentil seeds.
In three strain
competition Hawaii 5-0 formed the majority of lentil nodules under both
bacteriologically controlled and field conditions (comparing results shown on
Table 9). The competitive ability of
the other two strains changed under field conditions. Nitragin 128A12, a poor competitor in the growth chamber,
established and competed well in the field.
NZP 5400, a good competitor in the growth chamber, was a poor competitor
in this particular field. Means et al. (1965) observed that USDA 110 was a superior
competitor in both the greenhouse and in the field, but the second ranking
strain in greenhouse tests, USDA 121, was unsuccessful in field trials. Thus, under field conditions competition
between strains can be altered by many factors. The poor performance of NZP 5400 in the field could be due to
environmental factors such as moisture, temperature or pH. The pH of the field soil (5.8) was lower
than the vermiculite-nutrient medium used in the growth chamber study (6.5-7.0)
and pH has been shown to affect dominance in competition (Jones and Russell,
1975).
The specificity of the
fluorescent antibodies prepared against the somatic components of Hawaii 5-0,
NZP 5400 and Nitragin 128A12 made it easy to identify the strain(s) present in
individual lentil nodules. The
importance of pre-testing field soils for cross-reacting strains of infective
rhizobia and other soil bacteria deserves emphasis. In Field Experiment I it would not have been possible to
enumerate rhizobia accurately from the soil, had crossreacting bacteria been
present. In Field Experiment III the
uninoculated controls developed nodules between 5 and 8 weeks. Since no serologically cross-reactive
strains were previously isolated from this soil, controls must have been
contaminated by the three introduced strains as all control nodules contained
rhizobia which reacted 4+ with one of the three FA's.
Immunofluorescence
provided a sensitive means to identify the simultaneous presence of two strains
in the same nodule. In both growth chamber and field experiments a high
incidence of double infection was observed.
In 1974 Lindemann et al. used immunofluorescence to provide evidence for
double infection in soybean nodules and reported 32% double infections. Prior to this double infection was observed
infrequently and was believed to be a rare occurrence (Vincent, 1954; Means et
al. 1961). However, the techniques used by these investigators do not have the
sensitivity of immunofluorescence. In
1970 Skrdleta reported that only 10% of soybean nodules could contain two
strains of Rhizobium japonicum. Skrdleta used
immunodiffusion for nodule strain identification and this technique relies on a
critical antigen (strain) to antibody ratio.
Thus, if two strains were present in the same nodule one strain would
not be detected if its concentration were below the optimum required for
precipitin line development. Since 1974
other investigators have reported double infection for alfalfa, clover, pea,
and siratro (Pinto et al. 1974; Labandera and Vincent, 1975; Johnston and
Beringer, 1975; Franco and Vincent, 1976), but the highest incidence reported
was 25% (Marques Pinto et al. 1974).
All of these investigators used differential antibiotic resistance
markers for Rhizobium strain identification. Brockwell et al. (1977) compared the streptomycin-resistance
marker technique to immunodiffusion and reported that the marker technique
would probably fail to detect cases of mixed infection if the resistant strain
outnumbered the sensitive strain, as the former would overgrow the latter on
non-streptomycin agar. Furthermore,
antibiotic resistance markers should be used with caution in competition
experiments as Jones and Bromfield (1978) reported that the majority of singly
and doubly labeled mutants that they tested were inferior to the parental
strains in both effectiveness and competitiveness.
The results of two strain
competition in Growth Chamber Experiment I and Field Experiment I revealed
that two strains, Hawaii 5-0 and NZP 5400 were equally competitive and one-third of the nodules were doubly infected. In the same growth chamber experiment NZP
5400 dominated Nitragin 128A12 and only 3% of the nodules contained both
strains. These results show there
appears to be a relationship between competitiveness and the incidence of
double infection.
Some investigators
(Marques Pinto et al. 1974; Labandera and Vincent, 1975) have reported that
double infection in both alfalfa and clover nodules varies depending on the
species of host. Growth Chamber
Experiment II, however, has reinforced evidence that in two-strain competition
at least with three lentil cultivars double infection is frequent if two
strains are equally competitive, and rare if one strain dominates another. Jones and Bromfield (1978) reported that
double infection in colver nodules varied from 1% to 22% depending on the
strain pairs used in the mixed inoculum. This could also be true with lentils,
since in all two-strain competition experiments NZP 5400 and Nitragin 128A12
had fewer than 6% doubly-infected nodules.
These two strains did not form greater than 11% double infections in
three strain competition except in the case of the Chilean cultivar in Growth
Chamber Competition Experiment II. In
three strain competition in Field Experiment III the percentage of nodules
doubly-infected by both NZP 5400 and Nitragin 128A12 was always very low and
did not change over time, nor between phosphorus treatments.
Jones and Bromfield
(1978) reported lower frequencies of mixed infection on clover plants grown in
soil compared with those grown in agar tube culture. However, in all of these experiments field-grown lentils and
vermiculite-grown lentils had a high incidence of doubly-infected nodules, and
this phenomenon was related to competition.
Under the conditions of
these experiments three highly effective and competitive strains of Rhizobium
leguminosarum have been selected.
These strains have only been tested in the growth chamber and in
Hawaiian soils with low populations of indigenous lentil rhizobia. Before these strains can be recommended as
inocula their competitiveness and persistence should be assessed in other
localities under different conditions.
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